{
  "_id": "6a3ec787a319ef941449095b",
  "Package": "AquaSensR",
  "Title": "Quality Control and Analysis of Continuous Water Quality Data",
  "Version": "0.0.0.9000",
  "Authors@R": "c(\nperson(given = \"Marcus\",\nfamily = \"Beck\",\nrole = c(\"aut\", \"cre\"),\nemail = \"mbeck@tbep.org\",\ncomment = c(ORCID = \"0000-0002-4996-0059\")\n),\nperson(given = \"Ben\",\nfamily = \"Wetherill\",\nrole = c(\"aut\"),\nemail = \"bwetherill@acasak.com\",\ncomment = c(ORCID = \"0000-0002-8791-4256\")\n),\nperson(given = \"Mariel\",\nfamily = \"Sorlien\",\nrole = c(\"aut\"),\nemail = \"msorlien@nbep.org\",\ncomment = c(ORCID = \"0000-0001-7102-2918\")\n),\nperson(given = \"Christopher\",\nfamily = \"Whitney\",\nrole = c(\"aut\"),\nemail = \"Chris.Whitney@unh.edu\",\ncomment = c(ORCID = \"0000-0003-2349-9134\")\n),\nperson(given = \"Janelle\",\nfamily = \"Goeke\",\nrole = c(\"aut\"),\nemail = \"janelle.goeke@maine.edu\",\ncomment = c(ORCID = \"0000-0001-8056-4540\")\n),\nperson(given = \"Jill\",\nfamily = \"Carr\",\nrole = c(\"aut\"),\nemail = \"Jillian.Carr@umb.edu\",\ncomment = c(ORCID = \"0000-0003-1476-6640\")\n)\n)",
  "Description": "Methods for quality control and exploratory analysis of\ncontinuous surface water quality data.  Functions are developed\nto facilitate data formatting for the Water Quality Exchange\nNetwork\n<https://www.epa.gov/waterdata/water-quality-data-upload-wqx>\nand reporting of quality control to state agencies.",
  "License": "CC0",
  "Encoding": "UTF-8",
  "Roxygen": "list(markdown = TRUE)",
  "RoxygenNote": "7.3.3",
  "URL": "<https://github.com/massbays-tech/AquaSensR>,\n<https://massbays-tech.github.io/AquaSensR/>",
  "BugReports": "https://github.com/massbays-tech/AquaSensR/issues",
  "LazyData": "true",
  "LazyDataCompression": "xz",
  "Config/testthat/edition": "3",
  "VignetteBuilder": "quarto",
  "Config/pak/sysreqs": "libabsl-dev cmake libgdal-dev gdal-bin libgeos-dev\nmake libicu-dev libuv1-dev libxml2-dev libssl-dev libproj-dev\nlibsqlite3-dev libudunits2-dev libx11-dev zlib1g-dev",
  "Repository": "https://massbays-tech.r-universe.dev",
  "Date/Publication": "2026-06-26 17:17:22 UTC",
  "RemoteUrl": "https://github.com/massbays-tech/AquaSensR",
  "RemoteRef": "HEAD",
  "RemoteSha": "63c86952ff3393d35810767e31fd4dbf5eb8340a",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-06-26 18:36:00 UTC",
    "User": "root"
  },
  "Author": "Marcus Beck [aut, cre] (ORCID: <https://orcid.org/0000-0002-4996-0059>),\nBen Wetherill [aut] (ORCID: <https://orcid.org/0000-0002-8791-4256>),\nMariel Sorlien [aut] (ORCID: <https://orcid.org/0000-0001-7102-2918>),\nChristopher Whitney [aut] (ORCID:\n<https://orcid.org/0000-0003-2349-9134>),\nJanelle Goeke [aut] (ORCID: <https://orcid.org/0000-0001-8056-4540>),\nJill Carr [aut] (ORCID: <https://orcid.org/0000-0003-1476-6640>)",
  "Maintainer": "Marcus Beck <mbeck@tbep.org>",
  "MD5sum": "9ababfaf3038b602760554ccb18bb0e3",
  "_user": "massbays-tech",
  "_type": "src",
  "_file": "AquaSensR_0.0.0.9000.tar.gz",
  "_fileid": "6890feab00ac16a83657f4c2b67b21d855585183b683506b4216b5925e59eec1",
  "_filesize": 1781466,
  "_sha256": "6890feab00ac16a83657f4c2b67b21d855585183b683506b4216b5925e59eec1",
  "_created": "2026-06-26T18:36:00.000Z",
  "_published": "2026-06-26T18:40:06.731Z",
  "_distro": "resolute",
  "_jobs": [
    {
      "job": 83725576859,
      "time": 210,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7913606060"
    },
    {
      "job": 83725576778,
      "time": 205,
      "config": "linux-release-x86_64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "7913603600"
    },
    {
      "job": 83725576806,
      "time": 150,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7913585198"
    },
    {
      "job": 83725576771,
      "time": 147,
      "config": "macos-release-arm64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "7913583814"
    },
    {
      "job": 83724923104,
      "time": 223,
      "config": "source",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "7913533194"
    },
    {
      "job": 83725576750,
      "time": 186,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7913597413"
    },
    {
      "job": 83725576777,
      "time": 169,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7913592174"
    },
    {
      "job": 83725576751,
      "time": 160,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7913588622"
    },
    {
      "job": 83725576766,
      "time": 166,
      "config": "windows-release",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "7913590346"
    }
  ],
  "_buildurl": "https://github.com/r-universe/massbays-tech/actions/runs/28257694425",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/massbays-tech/AquaSensR",
  "_commit": {
    "id": "63c86952ff3393d35810767e31fd4dbf5eb8340a",
    "author": "fawda123 <mbafs2012@gmail.com>",
    "committer": "fawda123 <mbafs2012@gmail.com>",
    "message": "add groundwater as option for readASRusgs #7\n",
    "time": 1782494242
  },
  "_maintainer": {
    "name": "Marcus Beck",
    "email": "mbeck@tbep.org",
    "login": "fawda123",
    "description": "Scientist with the Tampa Bay Estuary Program",
    "uuid": 3086881,
    "orcid": "0000-0002-4996-0059"
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 4.1.0",
      "role": "Depends"
    },
    {
      "package": "bslib",
      "role": "Imports"
    },
    {
      "package": "dataRetrieval",
      "role": "Imports"
    },
    {
      "package": "dplyr",
      "role": "Imports"
    },
    {
      "package": "DT",
      "role": "Imports"
    },
    {
      "package": "lubridate",
      "role": "Imports"
    },
    {
      "package": "plotly",
      "role": "Imports"
    },
    {
      "package": "readxl",
      "role": "Imports"
    },
    {
      "package": "shiny",
      "role": "Imports"
    },
    {
      "package": "tidyr",
      "role": "Imports"
    },
    {
      "package": "writexl",
      "role": "Imports"
    },
    {
      "package": "zip",
      "role": "Imports"
    },
    {
      "package": "covr",
      "role": "Suggests"
    },
    {
      "package": "here",
      "role": "Suggests"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    },
    {
      "package": "patchwork",
      "role": "Suggests"
    },
    {
      "package": "quarto",
      "role": "Suggests"
    },
    {
      "package": "testthat",
      "version": ">= 3.0.0",
      "role": "Suggests"
    },
    {
      "package": "webshot2",
      "role": "Suggests"
    }
  ],
  "_owner": "massbays-tech",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [
    {
      "week": "2026-06",
      "n": 1
    },
    {
      "week": "2026-07",
      "n": 12
    },
    {
      "week": "2026-08",
      "n": 2
    },
    {
      "week": "2026-09",
      "n": 7
    },
    {
      "week": "2026-10",
      "n": 11
    },
    {
      "week": "2026-12",
      "n": 5
    },
    {
      "week": "2026-13",
      "n": 9
    },
    {
      "week": "2026-14",
      "n": 1
    },
    {
      "week": "2026-15",
      "n": 12
    },
    {
      "week": "2026-16",
      "n": 6
    },
    {
      "week": "2026-17",
      "n": 5
    },
    {
      "week": "2026-18",
      "n": 5
    },
    {
      "week": "2026-19",
      "n": 2
    },
    {
      "week": "2026-20",
      "n": 3
    },
    {
      "week": "2026-21",
      "n": 3
    },
    {
      "week": "2026-22",
      "n": 9
    },
    {
      "week": "2026-23",
      "n": 5
    },
    {
      "week": "2026-26",
      "n": 5
    }
  ],
  "_tags": [],
  "_stars": 0,
  "_contributors": [
    {
      "user": "fawda123",
      "count": 109,
      "uuid": 3086881
    }
  ],
  "_userbio": {
    "uuid": 102767385,
    "type": "organization",
    "name": "Massachusetts Bays National Estuary Partnership",
    "followers": 7,
    "description": "Group page for the Massachusetts Bays National Estuary Partnership"
  },
  "_downloads": {
    "count": 0,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/AquaSensR"
  },
  "_devurl": "https://github.com/massbays-tech/aquasensr",
  "_searchresults": 7,
  "_quarto": true,
  "_topics": [
    "quarto"
  ],
  "_rbuild": "4.6.1",
  "_assets": [
    "extra/AquaSensR.html",
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/NEWS.html",
    "extra/NEWS.txt",
    "extra/readme.html",
    "extra/readme.md",
    "manual.pdf"
  ],
  "_cranurl": false,
  "_exports": [
    "anlzASRflag",
    "checkASRcont",
    "checkASRdqo",
    "editASRdrift",
    "editASRflag",
    "formASRcont",
    "formASRdqo",
    "readASRcont",
    "readASRdqo",
    "readASRusgs",
    "utilASRdrift",
    "utilASRflag",
    "utilASRflagall",
    "utilASRflagflatline",
    "utilASRflaggross",
    "utilASRflagrleflat",
    "utilASRflagroc",
    "utilASRflagspike",
    "utilASRflagupdate",
    "utilASRimportcont",
    "utilASRopencheck"
  ],
  "_datasets": [
    {
      "name": "paramsASR",
      "title": "Master list and units for acceptable parameters",
      "object": "paramsASR",
      "class": [
        "tbl_df",
        "tbl",
        "data.frame"
      ],
      "fields": [
        "Parameter Group",
        "Parameter",
        "uom",
        "Label",
        "WQX Parameter",
        "WQX Unit of measure"
      ],
      "rows": 36,
      "table": true,
      "tojson": true
    }
  ],
  "_help": [
    {
      "page": "anlzASRflag",
      "title": "Plot QC flag results for a continuous monitoring parameter",
      "topics": [
        "anlzASRflag"
      ]
    },
    {
      "page": "checkASRcont",
      "title": "Check continuous monitoring data",
      "topics": [
        "checkASRcont"
      ]
    },
    {
      "page": "checkASRdqo",
      "title": "Check data quality objectives",
      "topics": [
        "checkASRdqo"
      ]
    },
    {
      "page": "editASRdrift",
      "title": "Interactive drift correction editor",
      "topics": [
        "editASRdrift"
      ]
    },
    {
      "page": "editASRflag",
      "title": "Interactive editor for continuous monitoring data",
      "topics": [
        "editASRflag"
      ]
    },
    {
      "page": "formASRcont",
      "title": "Format continuous data",
      "topics": [
        "formASRcont"
      ]
    },
    {
      "page": "formASRdqo",
      "title": "Format data quality objectives",
      "topics": [
        "formASRdqo"
      ]
    },
    {
      "page": "paramsASR",
      "title": "Master list and units for acceptable parameters",
      "topics": [
        "paramsASR"
      ]
    },
    {
      "page": "readASRcont",
      "title": "Read continuous monitoring data from an external file",
      "topics": [
        "readASRcont"
      ]
    },
    {
      "page": "readASRdqo",
      "title": "Read data quality objectives from an external file",
      "topics": [
        "readASRdqo"
      ]
    },
    {
      "page": "readASRusgs",
      "title": "Retrieve USGS time series data for overlay in editASRflag",
      "topics": [
        "readASRusgs"
      ]
    },
    {
      "page": "utilASRdrift",
      "title": "Apply linear drift correction to a continuous monitoring parameter",
      "topics": [
        "utilASRdrift"
      ]
    },
    {
      "page": "utilASRflag",
      "title": "Flag continuous monitoring data with QC criteria",
      "topics": [
        "utilASRflag"
      ]
    },
    {
      "page": "utilASRflagall",
      "title": "Apply QC flags to all parameters in continuous monitoring data",
      "topics": [
        "utilASRflagall"
      ]
    },
    {
      "page": "utilASRflagflatline",
      "title": "Apply flatline QC flag",
      "topics": [
        "utilASRflagflatline"
      ]
    },
    {
      "page": "utilASRflaggross",
      "title": "Apply gross range QC flag",
      "topics": [
        "utilASRflaggross"
      ]
    },
    {
      "page": "utilASRflagrleflat",
      "title": "Compute consecutive run lengths for flatline detection",
      "topics": [
        "utilASRflagrleflat"
      ]
    },
    {
      "page": "utilASRflagroc",
      "title": "Apply rate-of-change QC flag",
      "topics": [
        "utilASRflagroc"
      ]
    },
    {
      "page": "utilASRflagspike",
      "title": "Apply spike QC flag",
      "topics": [
        "utilASRflagspike"
      ]
    },
    {
      "page": "utilASRflagupdate",
      "title": "Update QC flag severity",
      "topics": [
        "utilASRflagupdate"
      ]
    },
    {
      "page": "utilASRimportcont",
      "title": "Import continuous monitoring data from an Excel file",
      "topics": [
        "utilASRimportcont"
      ]
    },
    {
      "page": "utilASRopencheck",
      "title": "Check if an Excel file is open and execute a read function",
      "topics": [
        "utilASRopencheck"
      ]
    }
  ],
  "_pkglogo": "https://github.com/massbays-tech/AquaSensR/raw/HEAD/man/figures/logo.png",
  "_readme": "https://github.com/massbays-tech/AquaSensR/raw/HEAD/README.md",
  "_rundeps": [
    "askpass",
    "base64enc",
    "bit",
    "bit64",
    "bslib",
    "cachem",
    "cellranger",
    "class",
    "classInt",
    "cli",
    "clipr",
    "commonmark",
    "cpp11",
    "crayon",
    "crosstalk",
    "curl",
    "data.table",
    "dataRetrieval",
    "DBI",
    "digest",
    "dplyr",
    "DT",
    "e1071",
    "evaluate",
    "farver",
    "fastmap",
    "fontawesome",
    "fs",
    "generics",
    "ggplot2",
    "glue",
    "gtable",
    "highr",
    "hms",
    "htmltools",
    "htmlwidgets",
    "httpuv",
    "httr",
    "httr2",
    "isoband",
    "jquerylib",
    "jsonlite",
    "KernSmooth",
    "knitr",
    "labeling",
    "later",
    "lazyeval",
    "lifecycle",
    "lubridate",
    "magrittr",
    "MASS",
    "memoise",
    "mime",
    "openssl",
    "otel",
    "pillar",
    "pkgconfig",
    "plotly",
    "prettyunits",
    "progress",
    "promises",
    "proxy",
    "purrr",
    "R6",
    "rappdirs",
    "RColorBrewer",
    "Rcpp",
    "readr",
    "readxl",
    "rematch",
    "rlang",
    "rmarkdown",
    "s2",
    "S7",
    "sass",
    "scales",
    "sf",
    "shiny",
    "sourcetools",
    "stringi",
    "stringr",
    "sys",
    "tibble",
    "tidyr",
    "tidyselect",
    "timechange",
    "tinytex",
    "tzdb",
    "units",
    "utf8",
    "vctrs",
    "viridisLite",
    "vroom",
    "whisker",
    "withr",
    "wk",
    "writexl",
    "xfun",
    "xml2",
    "xtable",
    "yaml",
    "zip"
  ],
  "_vignettes": [
    {
      "source": "AquaSensR.qmd",
      "filename": "AquaSensR.html",
      "title": "AquaSensR",
      "engine": "quarto::html",
      "headings": [],
      "created": "2026-02-10 13:19:43",
      "modified": "2026-02-10 13:58:23",
      "commits": 2
    },
    {
      "source": "driftcorrection.qmd",
      "filename": "driftcorrection.html",
      "title": "driftcorrection",
      "engine": "quarto::html",
      "headings": [
        "The correction algorithm",
        "Load the data",
        "utilASRdrift() for programmatic correction",
        "Arguments",
        "Basic usage",
        "Visualising the correction",
        "Multiple deployment periods",
        "editASRdrift() for interactive correction",
        "Interface overview",
        "Sidebar controls",
        "Corrections log",
        "Return value"
      ],
      "created": "2026-05-31 17:55:02",
      "modified": "2026-06-02 17:17:56",
      "commits": 4
    },
    {
      "source": "inputs.qmd",
      "filename": "inputs.html",
      "title": "inputs",
      "engine": "quarto::html",
      "headings": [
        "Load the package",
        "File paths",
        "Continuous monitoring data",
        "Format requirements",
        "Checks performed",
        "Example: triggering an error",
        "Output format",
        "Data quality objectives"
      ],
      "created": "2026-02-10 13:19:43",
      "modified": "2026-05-17 22:01:42",
      "commits": 19
    },
    {
      "source": "qcoverview.qmd",
      "filename": "qcoverview.html",
      "title": "qcoverview",
      "engine": "quarto::html",
      "headings": [
        "Load the data",
        "utilASRflag() to flag continuous data",
        "Arguments",
        "Basic usage",
        "Output",
        "QC checks explained",
        "1. Gross range",
        "2. Spike",
        "3. Rate of change",
        "4. Flatline",
        "anlzASRflag() to visualise flag results",
        "editASRflag() to review and clean data interactively",
        "Interface overview",
        "Selecting and removing points",
        "Sidebar controls",
        "DQO Settings panel",
        "Return value",
        "Iterative editing"
      ],
      "created": "2026-03-04 14:07:23",
      "modified": "2026-06-26 17:17:22",
      "commits": 28
    }
  ],
  "_score": 4.556302500767288,
  "_indexed": true,
  "_nocasepkg": "aquasensr",
  "_universes": [
    "massbays-tech",
    "fawda123"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.0.0.9000",
      "date": "2026-06-26T18:38:46.000Z",
      "distro": "resolute",
      "commit": "63c86952ff3393d35810767e31fd4dbf5eb8340a",
      "fileid": "a7a64a0bfa39292b38c3dbd5f09451eda593ef3f1115cb5fef210f31cd0586c4",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/massbays-tech/actions/runs/28257694425"
    },
    {
      "r": "4.6.1",
      "os": "linux",
      "version": "0.0.0.9000",
      "date": "2026-06-26T18:38:41.000Z",
      "distro": "resolute",
      "commit": "63c86952ff3393d35810767e31fd4dbf5eb8340a",
      "fileid": "b0277bb05b9eeff1e103e3b95b156104bb8c3556c128b2a35078ca9447035524",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/massbays-tech/actions/runs/28257694425"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "0.0.0.9000",
      "date": "2026-06-26T18:38:11.000Z",
      "commit": "63c86952ff3393d35810767e31fd4dbf5eb8340a",
      "fileid": "b1fbdb208a3f15d84f8eb7d6fd89969f5aee468468d28600090c36f21aa93360",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/massbays-tech/actions/runs/28257694425"
    },
    {
      "r": "4.6.1",
      "os": "mac",
      "version": "0.0.0.9000",
      "date": "2026-06-26T18:38:02.000Z",
      "commit": "63c86952ff3393d35810767e31fd4dbf5eb8340a",
      "fileid": "9a24a2f756c17d4cdf86b9a85992949d02a998f872ad928a539092ac0a5d811c",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/massbays-tech/actions/runs/28257694425"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "0.0.0.9000",
      "date": "2026-06-26T18:39:20.000Z",
      "commit": "63c86952ff3393d35810767e31fd4dbf5eb8340a",
      "fileid": "cd68a646ce8bf67b45d8e5531911ea74c2c28ddf2bdb2a83e83f4ac772c9da5c",
      "status": "success",
      "buildurl": "https://github.com/r-universe/massbays-tech/actions/runs/28257694425"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "0.0.0.9000",
      "date": "2026-06-26T18:37:46.000Z",
      "commit": "63c86952ff3393d35810767e31fd4dbf5eb8340a",
      "fileid": "db95232d877f9314c152ec1de5d8545d3eeccb14c85f72a1a5daab062ff3fe7d",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/massbays-tech/actions/runs/28257694425"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "0.0.0.9000",
      "date": "2026-06-26T18:37:40.000Z",
      "commit": "63c86952ff3393d35810767e31fd4dbf5eb8340a",
      "fileid": "77c47b08c2e78c16911d60c4cbbe6b20b1df572c9cd2b47025e61eba57925a57",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/massbays-tech/actions/runs/28257694425"
    },
    {
      "r": "4.6.1",
      "os": "win",
      "version": "0.0.0.9000",
      "date": "2026-06-26T18:37:40.000Z",
      "commit": "63c86952ff3393d35810767e31fd4dbf5eb8340a",
      "fileid": "b26a0ceffdc9e11ed4942336c3130a4f930fa82d8157e13f1f96f0ec0ba313b9",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/massbays-tech/actions/runs/28257694425"
    }
  ]
}